Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FMG_1587Iron-sulfur cofactor synthesis protein. (362 aa)    
Predicted Functional Partners:
FMG_0473
Iron-sulfur cofactor synthesis protein NifU homolog.
 0.988
thiI
Thiamine biosynthesis protein; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
  
 0.971
FMG_0558
Iron-sulfur cofactor synthesis protein.
  
  
 
0.925
mnmA
5-methylaminomethyl-2-thiouridylate- methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
 
  
 0.889
selD
Selenophosphate synthetase; Synthesizes selenophosphate from selenide and ATP.
  
 
 0.886
FMG_0624
Putative transcriptional regulator.
  
 0.862
FMG_0448
Conserved hypothetical protein; Belongs to the sulfur carrier protein TusA family.
   
 
 0.823
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
    
 
 0.770
dnaK
Heat shock protein; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.660
FMG_1429
Molybdenum cofactor biosynthesis protein C.
   
 
 0.570
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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