Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FMG_1614Hypothetical protein. (118 aa)    
Predicted Functional Partners:
FMG_1615
Phosphotransacetylase.
       0.773
FMG_1616
Conserved hypothetical protein.
       0.701
FMG_1617
Aminotransferase required for NAD biosynthesis.
       0.701
FMG_1618
Methenyl tetrahydrofolate cyclohydrolase.
       0.701
FMG_1619
Chromosome partitioning protein ParB homolog; Belongs to the ParB family.
       0.701
FMG_1620
Chromosome partitioning protein ParA homolog.
       0.701
cinA
Competence-damage inducible protein; Belongs to the CinA family.
       0.701
FMG_1613
Conserved hypothetical protein.
       0.668
FMG_1612
Conserved hypothetical protein.
       0.466
Your Current Organism:
Finegoldia magna ATCC 29328
NCBI taxonomy Id: 334413
Other names: F. magna ATCC 29328, Finegoldia magna str. ATCC 29328, Finegoldia magna strain ATCC 29328
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