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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACOC_LOCUS915Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (130 aa)    
Predicted Functional Partners:
ACOC_LOCUS98
Uncharacterized protein.
   
 
 0.999
ACOC_LOCUS132
RIBOSOMAL_L9 domain-containing protein.
  
 
 0.999
ACOC_LOCUS243
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
  
 0.999
ACOC_LOCUS277
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
   
 
 0.999
ACOC_LOCUS385
Uncharacterized protein.
   
 0.999
ACOC_LOCUS788
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
  
 0.999
ACOC_LOCUS902
Uncharacterized protein.
  
 
 0.999
ACOC_LOCUS918
Ribosomal_L14e domain-containing protein.
  
 0.999
ACOC_LOCUS1035
KOW domain-containing protein.
  
 0.999
ACOC_LOCUS1123
Uncharacterized protein.
   
 
 0.999
Your Current Organism:
Angiostrongylus costaricensis
NCBI taxonomy Id: 334426
Other names: A. costaricensis, American rat lungworm, Angiostrongylus (Parastrongylus) costaricensis
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