Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACOC_LOCUS915Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family. (130 aa)    
Predicted Functional Partners:
ACOC_LOCUS243
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
  
 0.999
ACOC_LOCUS385
Uncharacterized protein.
   
 0.999
ACOC_LOCUS788
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
  
 0.999
ACOC_LOCUS1465
Ribosomal_S10 domain-containing protein.
  
 0.999
ACOC_LOCUS1537
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
  
 0.999
ACOC_LOCUS2907
Ubiquitin-like domain-containing protein.
   
 0.999
ACOC_LOCUS2959
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
  
 0.999
ACOC_LOCUS3897
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
  
 0.999
ACOC_LOCUS5610
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
  
 0.999
ACOC_LOCUS5752
Uncharacterized protein.
   
 0.999
Your Current Organism:
Angiostrongylus costaricensis
NCBI taxonomy Id: 334426
Other names: A. costaricensis, American rat lungworm, Angiostrongylus (Parastrongylus) costaricensis
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