STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACOC_LOCUS1009Uncharacterized protein. (271 aa)    
Predicted Functional Partners:
ACOC_LOCUS6499
Neur_chan_LBD domain-containing protein.
  
  0.690
ACOC_LOCUS5623
Neur_chan_LBD domain-containing protein.
  
 
 0.636
A0A0R3PWC8
Neur_chan_LBD domain-containing protein.
  
  0.584
A0A0R3PX10
Neur_chan_memb domain-containing protein.
  
     0.504
A0A0R3PY75
Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
 
0.493
ACOC_LOCUS802
Tyrosine-protein kinase.
    
  0.478
ACOC_LOCUS9426
Tyrosine-protein kinase.
    
  0.478
A0A158PMP0
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
 
0.477
ACOC_LOCUS2537
Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
 
0.476
ACOC_LOCUS3941
Uncharacterized protein.
  
 
0.473
Your Current Organism:
Angiostrongylus costaricensis
NCBI taxonomy Id: 334426
Other names: A. costaricensis, American rat lungworm, Angiostrongylus (Parastrongylus) costaricensis
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