Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACOC_LOCUS1253RRM domain-containing protein. (201 aa)    
Predicted Functional Partners:
ACOC_LOCUS184
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.742
ACOC_LOCUS6516
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.742
ACOC_LOCUS2952
Uncharacterized protein.
 
      0.735
ACOC_LOCUS6938
RING-type domain-containing protein.
    
 0.730
ACOC_LOCUS8652
RING-type domain-containing protein.
    
 0.730
ACOC_LOCUS7013
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.712
ACOC_LOCUS142
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.709
ACOC_LOCUS1780
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.709
A0A3P7IDI6
Uncharacterized protein.
    
 
 0.648
ACOC_LOCUS8983
Uncharacterized protein.
    
 0.630
Your Current Organism:
Angiostrongylus costaricensis
NCBI taxonomy Id: 334426
Other names: A. costaricensis, American rat lungworm, Angiostrongylus (Parastrongylus) costaricensis
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