Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACOC_LOCUS1258Uncharacterized protein. (318 aa)    
Predicted Functional Partners:
ACOC_LOCUS4932
Uncharacterized protein.
    
 0.994
ACOC_LOCUS1672
Uncharacterized protein.
   
 0.992
ACOC_LOCUS7314
Uncharacterized protein.
   
 0.991
A0A0R3Q065
Uncharacterized protein.
    
 0.950
ACOC_LOCUS2515
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
  
  
 
0.939
ACOC_LOCUS5658
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.935
A0A0R3PVJ2
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.935
ACOC_LOCUS2274
Uncharacterized protein.
    
 0.934
ACOC_LOCUS972
Uncharacterized protein.
    
 0.918
A0A0R3PY14
Uncharacterized protein.
     
 
0.912
Your Current Organism:
Angiostrongylus costaricensis
NCBI taxonomy Id: 334426
Other names: A. costaricensis, American rat lungworm, Angiostrongylus (Parastrongylus) costaricensis
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