STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACOC_LOCUS3719Uncharacterized protein. (232 aa)    
Predicted Functional Partners:
ACOC_LOCUS596
Uncharacterized protein.
   
 0.920
ACOC_LOCUS6314
Uncharacterized protein.
   
 0.892
ACOC_LOCUS2977
Uncharacterized protein.
   
 0.768
ACOC_LOCUS5471
E3 ubiquitin-protein ligase.
    
  0.630
ACOC_LOCUS255
Calponin-homology (CH) domain-containing protein.
  
  
  0.623
ACOC_LOCUS7130
Uncharacterized protein; Belongs to the tropomyosin family.
    
 0.546
ACOC_LOCUS792
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.529
ACOC_LOCUS6615
Guanylate kinase-like domain-containing protein.
    
 0.523
A0A158PM67
DH domain-containing protein.
     
 0.522
ACOC_LOCUS6614
PDZ domain-containing protein.
    
 0.521
Your Current Organism:
Angiostrongylus costaricensis
NCBI taxonomy Id: 334426
Other names: A. costaricensis, American rat lungworm, Angiostrongylus (Parastrongylus) costaricensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.