STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACOC_LOCUS4443Uncharacterized protein. (2424 aa)    
Predicted Functional Partners:
ACOC_LOCUS614
zf-Di19 domain-containing protein.
    
 
 0.791
ACOC_LOCUS6057
ThiF domain-containing protein.
     
 0.487
ACOC_LOCUS7618
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
     
 0.487
ACOC_LOCUS5814
HECT domain-containing protein.
   
  
 0.463
ACOC_LOCUS5493
Uncharacterized protein.
     
 0.427
ACOC_LOCUS6045
E2_bind domain-containing protein.
     
 0.427
A0A158PL26
Uncharacterized protein.
     
 0.427
Your Current Organism:
Angiostrongylus costaricensis
NCBI taxonomy Id: 334426
Other names: A. costaricensis, American rat lungworm, Angiostrongylus (Parastrongylus) costaricensis
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