ACOC_LOCUS6956 protein (Angiostrongylus costaricensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ACOC_LOCUS6956

Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (359 aa)

Predicted Functional Partners:

ACOC_LOCUS8718

0.953

ACOC_LOCUS6966

0.949

ACOC_LOCUS5969

0.941

ACOC_LOCUS2861

0.734

A0A158PL75

0.705

ACOC_LOCUS3490

0.694

ACOC_LOCUS4058

0.694

A0A0R3PZK2

0.694

ACOC_LOCUS322

0.676

ACOC_LOCUS2605

0.638

Your Current Organism:

Angiostrongylus costaricensis

NCBI taxonomy Id: 334426
Other names: A. costaricensis, American rat lungworm, Angiostrongylus (Parastrongylus) costaricensis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R3PZK2	A0A158PL75	A0A0R3PZK2	A0A158PL75	Uncharacterized protein.	Uncharacterized protein.	0.558
A0A0R3PZK2	ACOC_LOCUS2605	A0A0R3PZK2	A0A0R3PES5	Uncharacterized protein.	BPL/LPL catalytic domain-containing protein.	0.685
A0A0R3PZK2	ACOC_LOCUS3490	A0A0R3PZK2	A0A0R3PGQ4	Uncharacterized protein.	CN hydrolase domain-containing protein.	0.534
A0A0R3PZK2	ACOC_LOCUS4058	A0A0R3PZK2	A0A0R3PI80	Uncharacterized protein.	CN hydrolase domain-containing protein.	0.536
A0A0R3PZK2	ACOC_LOCUS5969	A0A0R3PZK2	A0A0R3PM86	Uncharacterized protein.	BPL/LPL catalytic domain-containing protein.	0.712
A0A0R3PZK2	ACOC_LOCUS6956	A0A0R3PZK2	A0A0R3PP66	Uncharacterized protein.	Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.	0.694
A0A158PL75	A0A0R3PZK2	A0A158PL75	A0A0R3PZK2	Uncharacterized protein.	Uncharacterized protein.	0.558
A0A158PL75	ACOC_LOCUS2605	A0A158PL75	A0A0R3PES5	Uncharacterized protein.	BPL/LPL catalytic domain-containing protein.	0.790
A0A158PL75	ACOC_LOCUS3490	A0A158PL75	A0A0R3PGQ4	Uncharacterized protein.	CN hydrolase domain-containing protein.	0.558
A0A158PL75	ACOC_LOCUS4058	A0A158PL75	A0A0R3PI80	Uncharacterized protein.	CN hydrolase domain-containing protein.	0.558
A0A158PL75	ACOC_LOCUS5969	A0A158PL75	A0A0R3PM86	Uncharacterized protein.	BPL/LPL catalytic domain-containing protein.	0.651
A0A158PL75	ACOC_LOCUS6956	A0A158PL75	A0A0R3PP66	Uncharacterized protein.	Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.	0.705
ACOC_LOCUS2605	A0A0R3PZK2	A0A0R3PES5	A0A0R3PZK2	BPL/LPL catalytic domain-containing protein.	Uncharacterized protein.	0.685
ACOC_LOCUS2605	A0A158PL75	A0A0R3PES5	A0A158PL75	BPL/LPL catalytic domain-containing protein.	Uncharacterized protein.	0.790
ACOC_LOCUS2605	ACOC_LOCUS3490	A0A0R3PES5	A0A0R3PGQ4	BPL/LPL catalytic domain-containing protein.	CN hydrolase domain-containing protein.	0.685
ACOC_LOCUS2605	ACOC_LOCUS4058	A0A0R3PES5	A0A0R3PI80	BPL/LPL catalytic domain-containing protein.	CN hydrolase domain-containing protein.	0.685
ACOC_LOCUS2605	ACOC_LOCUS5969	A0A0R3PES5	A0A0R3PM86	BPL/LPL catalytic domain-containing protein.	BPL/LPL catalytic domain-containing protein.	0.662
ACOC_LOCUS2605	ACOC_LOCUS6956	A0A0R3PES5	A0A0R3PP66	BPL/LPL catalytic domain-containing protein.	Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.	0.638
ACOC_LOCUS2605	ACOC_LOCUS6966	A0A0R3PES5	A0A158PHZ7	BPL/LPL catalytic domain-containing protein.	GCP_N_terminal domain-containing protein.	0.601
ACOC_LOCUS2605	ACOC_LOCUS8718	A0A0R3PES5	A0A0R3PSR4	BPL/LPL catalytic domain-containing protein.	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.	0.568

page 1 of 4

Server load: low (14%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2023

Credits

Access

Info

About