STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACOC_LOCUS7465Uncharacterized protein. (463 aa)    
Predicted Functional Partners:
ACOC_LOCUS903
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.978
ACOC_LOCUS1176
RRM domain-containing protein.
    
 0.961
ACOC_LOCUS9147
Uncharacterized protein.
   
 0.959
ACOC_LOCUS3661
PUA domain-containing protein.
  
 
 0.956
A0A158PKF6
Uncharacterized protein.
    
 0.954
ACOC_LOCUS2796
Uncharacterized protein.
  
 0.949
ACOC_LOCUS6055
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.924
ACOC_LOCUS1218
WD_REPEATS_REGION domain-containing protein.
   
 0.918
A0A0R3PYP3
Uncharacterized protein.
   
 0.917
A0A0R3Q2B1
RNA helicase.
  
 
0.917
Your Current Organism:
Angiostrongylus costaricensis
NCBI taxonomy Id: 334426
Other names: A. costaricensis, American rat lungworm, Angiostrongylus (Parastrongylus) costaricensis
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