STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACOC_LOCUS9905Uncharacterized protein. (369 aa)    
Predicted Functional Partners:
ACOC_LOCUS184
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.920
ACOC_LOCUS6310
Uncharacterized protein.
   
 0.824
ACOC_LOCUS6516
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.730
A0A0R3PZR6
Uncharacterized protein.
    
   0.694
ACOC_LOCUS8652
RING-type domain-containing protein.
    
 0.609
ACOC_LOCUS5992
Uncharacterized protein.
    
 0.574
ACOC_LOCUS1135
Ribosomal_S27 domain-containing protein.
    
  0.570
ACOC_LOCUS2003
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
  0.570
ACOC_LOCUS2241
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
  0.537
ACOC_LOCUS2094
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
  0.537
Your Current Organism:
Angiostrongylus costaricensis
NCBI taxonomy Id: 334426
Other names: A. costaricensis, American rat lungworm, Angiostrongylus (Parastrongylus) costaricensis
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