STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0R3PX00PDZ domain-containing protein. (512 aa)    
Predicted Functional Partners:
ACOC_LOCUS9547
ZZ-type domain-containing protein.
    
 
 0.746
ACOC_LOCUS6258
Calponin-homology (CH) domain-containing protein.
    
 
 0.632
ACOC_LOCUS6259
Uncharacterized protein.
    
 
 0.632
A0A0R3PVF2
Uncharacterized protein.
   
  
 0.583
ACOC_LOCUS2477
PID domain-containing protein.
      
 0.559
ACOC_LOCUS9241
Uncharacterized protein.
      
 0.548
A0A158PLD6
Uncharacterized protein.
    
 
 0.543
ACOC_LOCUS1800
Uncharacterized protein.
    
 
0.507
ACOC_LOCUS7117
Uncharacterized protein.
   
  
 0.463
ACOC_LOCUS8200
Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage.
      
 0.445
Your Current Organism:
Angiostrongylus costaricensis
NCBI taxonomy Id: 334426
Other names: A. costaricensis, American rat lungworm, Angiostrongylus (Parastrongylus) costaricensis
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