STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0R3Q1U8ABC transmembrane type-1 domain-containing protein. (453 aa)    
Predicted Functional Partners:
ACOC_LOCUS8975
ABC transporter domain-containing protein.
 
     0.920
A0A158PLT2
ABC transporter domain-containing protein.
 
     0.919
ACOC_LOCUS5185
Uncharacterized protein.
 
      0.795
ACOC_LOCUS7993
Uncharacterized protein.
 
     0.740
ACOC_LOCUS2138
SCP2 domain-containing protein.
   
 0.656
ACOC_LOCUS6584
Uncharacterized protein.
 
  
 0.629
ACOC_LOCUS7825
Uncharacterized protein.
    
 0.629
ACOC_LOCUS7213
Uncharacterized protein.
    
 0.629
ACOC_LOCUS4679
Uncharacterized protein.
 
  
0.588
ACOC_LOCUS4338
RING-type domain-containing protein.
    
 0.573
Your Current Organism:
Angiostrongylus costaricensis
NCBI taxonomy Id: 334426
Other names: A. costaricensis, American rat lungworm, Angiostrongylus (Parastrongylus) costaricensis
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