STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACOC_LOCUS707Uncharacterized protein. (329 aa)    
Predicted Functional Partners:
ACOC_LOCUS495
Uncharacterized protein.
   
 
 0.938
ACOC_LOCUS9573
CTP_transf_like domain-containing protein.
     
 0.938
ACOC_LOCUS1418
WD_REPEATS_REGION domain-containing protein.
    
 0.915
ACOC_LOCUS2584
Uncharacterized protein.
  
  
 
0.909
ACOC_LOCUS5835
Methyltransf_11 domain-containing protein.
    
 0.908
A0A0R3PZZ7
Methyltransf_11 domain-containing protein.
    
 0.908
ACOC_LOCUS1149
GP-PDE domain-containing protein.
    
 0.907
ACOC_LOCUS6825
Uncharacterized protein.
  
  
 
0.906
ACOC_LOCUS8958
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.900
ACOC_LOCUS5767
Uncharacterized protein.
    
 0.800
Your Current Organism:
Angiostrongylus costaricensis
NCBI taxonomy Id: 334426
Other names: A. costaricensis, American rat lungworm, Angiostrongylus (Parastrongylus) costaricensis
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