STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACOC_LOCUS7494Uncharacterized protein. (308 aa)    
Predicted Functional Partners:
ACOC_LOCUS3289
Uncharacterized protein.
   
 0.771
ACOC_LOCUS2442
RRM domain-containing protein.
    
 0.764
ACOC_LOCUS3144
Transcription elongation factor SPT5.
    
 0.729
ACOC_LOCUS5334
Polypeptide N-acetylgalactosaminyltransferase.
     
 0.703
A0A0R3Q1J1
RPOLD domain-containing protein.
    
  0.691
ACOC_LOCUS1833
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
 0.684
ACOC_LOCUS7348
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
  0.682
ACOC_LOCUS5754
Uncharacterized protein.
    
 0.673
ACOC_LOCUS5349
Uncharacterized protein.
    
  0.670
ACOC_LOCUS2553
Uncharacterized protein.
    
  0.668
Your Current Organism:
Angiostrongylus costaricensis
NCBI taxonomy Id: 334426
Other names: A. costaricensis, American rat lungworm, Angiostrongylus (Parastrongylus) costaricensis
Server load: low (12%) [HD]