Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A0R3Q1J1 | ACOC_LOCUS1833 | A0A0R3Q1J1 | A0A0R3PD56 | RPOLD domain-containing protein. | Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. | 0.998 |
A0A0R3Q1J1 | ACOC_LOCUS2442 | A0A0R3Q1J1 | A0A0R3PEF2 | RPOLD domain-containing protein. | RRM domain-containing protein. | 0.932 |
A0A0R3Q1J1 | ACOC_LOCUS2553 | A0A0R3Q1J1 | A0A0R3PEN2 | RPOLD domain-containing protein. | Uncharacterized protein. | 0.999 |
A0A0R3Q1J1 | ACOC_LOCUS3144 | A0A0R3Q1J1 | A0A158PFA8 | RPOLD domain-containing protein. | Transcription elongation factor SPT5. | 0.999 |
A0A0R3Q1J1 | ACOC_LOCUS3289 | A0A0R3Q1J1 | A0A0R3PGA5 | RPOLD domain-containing protein. | Uncharacterized protein. | 0.971 |
A0A0R3Q1J1 | ACOC_LOCUS5349 | A0A0R3Q1J1 | A0A0R3PKZ7 | RPOLD domain-containing protein. | Uncharacterized protein. | 0.999 |
A0A0R3Q1J1 | ACOC_LOCUS5754 | A0A0R3Q1J1 | A0A158PGW5 | RPOLD domain-containing protein. | Uncharacterized protein. | 0.999 |
A0A0R3Q1J1 | ACOC_LOCUS7348 | A0A0R3Q1J1 | A0A0R3PPZ8 | RPOLD domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.999 |
A0A0R3Q1J1 | ACOC_LOCUS7494 | A0A0R3Q1J1 | A0A158PIF1 | RPOLD domain-containing protein. | Uncharacterized protein. | 0.691 |
ACOC_LOCUS1833 | A0A0R3Q1J1 | A0A0R3PD56 | A0A0R3Q1J1 | Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. | RPOLD domain-containing protein. | 0.998 |
ACOC_LOCUS1833 | ACOC_LOCUS2442 | A0A0R3PD56 | A0A0R3PEF2 | Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. | RRM domain-containing protein. | 0.941 |
ACOC_LOCUS1833 | ACOC_LOCUS2553 | A0A0R3PD56 | A0A0R3PEN2 | Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. | Uncharacterized protein. | 0.993 |
ACOC_LOCUS1833 | ACOC_LOCUS3144 | A0A0R3PD56 | A0A158PFA8 | Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. | Transcription elongation factor SPT5. | 0.999 |
ACOC_LOCUS1833 | ACOC_LOCUS3289 | A0A0R3PD56 | A0A0R3PGA5 | Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. | Uncharacterized protein. | 0.944 |
ACOC_LOCUS1833 | ACOC_LOCUS5349 | A0A0R3PD56 | A0A0R3PKZ7 | Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. | Uncharacterized protein. | 0.996 |
ACOC_LOCUS1833 | ACOC_LOCUS5754 | A0A0R3PD56 | A0A158PGW5 | Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. | Uncharacterized protein. | 0.995 |
ACOC_LOCUS1833 | ACOC_LOCUS7348 | A0A0R3PD56 | A0A0R3PPZ8 | Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.996 |
ACOC_LOCUS1833 | ACOC_LOCUS7494 | A0A0R3PD56 | A0A158PIF1 | Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. | Uncharacterized protein. | 0.684 |
ACOC_LOCUS2442 | A0A0R3Q1J1 | A0A0R3PEF2 | A0A0R3Q1J1 | RRM domain-containing protein. | RPOLD domain-containing protein. | 0.932 |
ACOC_LOCUS2442 | ACOC_LOCUS1833 | A0A0R3PEF2 | A0A0R3PD56 | RRM domain-containing protein. | Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. | 0.941 |
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