STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACOC_LOCUS8234Uncharacterized protein. (179 aa)    
Predicted Functional Partners:
ACOC_LOCUS2530
Diphosphomevalonate decarboxylase.
  
 0.963
ACOC_LOCUS6716
Nudix hydrolase domain-containing protein.
  
 
 0.947
ACOC_LOCUS6885
Uncharacterized protein.
  
 0.931
ACOC_LOCUS9159
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
    
 0.910
ACOC_LOCUS4845
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.905
A0A0R3PZV1
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
   
 0.899
ACOC_LOCUS300
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
  
 
 0.886
A0A0R3PZU9
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
  
 
 0.884
ACOC_LOCUS9605
FMN hydroxy acid dehydrogenase domain-containing protein.
  
 
 0.884
ACOC_LOCUS7135
Uncharacterized protein.
     
 0.883
Your Current Organism:
Angiostrongylus costaricensis
NCBI taxonomy Id: 334426
Other names: A. costaricensis, American rat lungworm, Angiostrongylus (Parastrongylus) costaricensis
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