STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACOC_LOCUS9931AA_TRNA_LIGASE_II domain-containing protein. (619 aa)    
Predicted Functional Partners:
ACOC_LOCUS253
Uncharacterized protein.
  
 0.997
A0A0R3Q0K8
AA_TRNA_LIGASE_II domain-containing protein.
  
  
 0.982
ACOC_LOCUS1204
Uncharacterized protein.
  
 
 0.942
ACOC_LOCUS9099
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.917
ACOC_LOCUS9827
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.917
ACOC_LOCUS7538
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
 
 0.904
ACOC_LOCUS9806
TPR_REGION domain-containing protein.
  
 
 0.904
ACOC_LOCUS5802
Amidase domain-containing protein.
  
 0.895
ACOC_LOCUS2864
AA_TRNA_LIGASE_II domain-containing protein.
  
 0.894
ACOC_LOCUS6194
Amidase domain-containing protein.
  
 0.883
Your Current Organism:
Angiostrongylus costaricensis
NCBI taxonomy Id: 334426
Other names: A. costaricensis, American rat lungworm, Angiostrongylus (Parastrongylus) costaricensis
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