STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOF23803.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)    
Predicted Functional Partners:
OOF21281.1
CoA-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.803
OOF23802.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.790
OOF26250.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.686
OOF21369.1
Diaminobutyrate--2-oxoglutarate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.529
OOF27608.1
Bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase; Proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.514
OOF25240.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.504
OOF24105.1
(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.499
OOF27583.1
NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.480
OOF24470.1
Aspartate aminotransferase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.476
OOF26928.1
Flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.470
Your Current Organism:
Salinivibrio proteolyticus
NCBI taxonomy Id: 334715
Other names: CIP 106635 [[Salinivibrio costicola subsp. vallismortis]], CIP 109598, DSM 19052, DSM 8285 [[Salinivibrio costicola subsp. vallismortis]], JCM 15096 [[Salinivibrio costicola subsp. vallismortis]], S. proteolyticus, Salinivibrio costicola subsp. vallismortis, Salinivibrio costicola subsp. vallismortis Huang et al. 2000, Salinivibrio proteolyticus Ali Amoozegar et al. 2008 emend. Lopez-Hermoso et al. 2018, Salinivibrio sp. AF-2004, Salinivibrio sp. CBH450, Salinivibrio vallismortis, strain AF-2004, strain DV [[Salinivibrio costicola subsp. vallismortis]]
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