STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000826145_00977Unannotated protein. (446 aa)    
Predicted Functional Partners:
GCA_000826145_01268
Unannotated protein.
   
  
 0.852
GCA_000826145_01269
Unannotated protein.
   
  
 0.781
GCA_000826145_01031
Unannotated protein.
   
  
 0.593
GCA_000826145_01864
Unannotated protein.
   
  
 0.593
GCA_000826145_00693
Unannotated protein.
 
  
 0.574
GCA_000826145_00126
Unannotated protein.
 
     0.513
GCA_000826145_00976
Unannotated protein.
     
 0.506
GCA_000826145_00978
Unannotated protein.
       0.464
GCA_000826145_00415
Unannotated protein.
  
  
 0.400
Your Current Organism:
Sporosarcina koreensis
NCBI taxonomy Id: 334735
Other names: DSM 16921, JCM 16400, KACC 11299, S. koreensis, Sporosarcina koreensis Kwon et al. 2007, Sporosarcina sp. F73, strain F73
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.