STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001015195_00135Unannotated protein. (261 aa)    
Predicted Functional Partners:
GCA_001015195_00134
Unannotated protein.
       0.843
GCA_001015195_00769
Unannotated protein.
 
 
 0.673
GCA_001015195_02374
Unannotated protein.
    
  0.551
GCA_001015195_03664
Unannotated protein.
 
  
  0.520
GCA_001015195_04599
Unannotated protein.
    
 0.518
GCA_001015195_00131
Unannotated protein.
  
 
  0.515
GCA_001015195_00132
Unannotated protein.
       0.495
GCA_001015195_00133
Unannotated protein.
       0.495
GCA_001015195_00336
Unannotated protein.
    
  0.457
GCA_001015195_02552
Unannotated protein.
    
  0.457
Your Current Organism:
Sphingomonas sp. Y57
NCBI taxonomy Id: 334801
Other names: S. sp. Y57
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.