STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001015195_00486Unannotated protein. (301 aa)    
Predicted Functional Partners:
GCA_001015195_03987
Unannotated protein.
 
 0.992
GCA_001015195_00485
Unannotated protein.
  
 
 0.988
GCA_001015195_03902
Unannotated protein.
  
 0.955
GCA_001015195_00353
Unannotated protein.
  
 
 0.950
GCA_001015195_04727
Unannotated protein.
 
 
 0.949
GCA_001015195_04636
Unannotated protein.
  
 0.918
GCA_001015195_02913
Unannotated protein.
  
 0.910
GCA_001015195_02433
Unannotated protein.
    
 0.894
GCA_001015195_03367
Unannotated protein.
    
 0.888
GCA_001015195_03986
Unannotated protein.
 
 
 0.870
Your Current Organism:
Sphingomonas sp. Y57
NCBI taxonomy Id: 334801
Other names: S. sp. Y57
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.