STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001015195_02790Unannotated protein. (509 aa)    
Predicted Functional Partners:
GCA_001015195_02791
Unannotated protein.
     
 0.866
GCA_001015195_04408
Unannotated protein.
    
  0.802
GCA_001015195_02789
Unannotated protein.
       0.789
GCA_001015195_00709
Unannotated protein.
    
 0.782
GCA_001015195_01970
Unannotated protein.
    
  0.763
GCA_001015195_01167
Unannotated protein.
  
 
  0.729
GCA_001015195_02792
Unannotated protein.
       0.605
GCA_001015195_03912
Unannotated protein.
  
  
 0.571
GCA_001015195_02784
Unannotated protein.
    
  0.464
GCA_001015195_01901
Unannotated protein.
    
  0.453
Your Current Organism:
Sphingomonas sp. Y57
NCBI taxonomy Id: 334801
Other names: S. sp. Y57
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.