STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001015195_03309Unannotated protein. (94 aa)    
Predicted Functional Partners:
GCA_001015195_03308
Unannotated protein.
 
 
 0.988
GCA_001015195_03156
Unannotated protein.
 
 
 0.872
GCA_001015195_02080
Unannotated protein.
 
 
 0.826
GCA_001015195_05152
Unannotated protein.
 
 
   0.794
GCA_001015195_03513
Unannotated protein.
 
 
   0.791
GCA_001015195_01003
Unannotated protein.
  
 
 0.771
GCA_001015195_02101
Unannotated protein.
  
 
 0.771
GCA_001015195_02063
Unannotated protein.
  
 
 0.675
GCA_001015195_03184
Unannotated protein.
  
 
 0.675
GCA_001015195_03166
Unannotated protein.
 
   
 0.639
Your Current Organism:
Sphingomonas sp. Y57
NCBI taxonomy Id: 334801
Other names: S. sp. Y57
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.