STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001015195_05026Unannotated protein. (220 aa)    
Predicted Functional Partners:
GCA_001015195_05024
Unannotated protein.
 
     0.704
GCA_001015195_03587
Unannotated protein.
  
     0.683
GCA_001015195_00761
Unannotated protein.
    
  0.653
GCA_001015195_01587
Unannotated protein.
    
  0.653
GCA_001015195_04723
Unannotated protein.
    
  0.653
GCA_001015195_04220
Unannotated protein.
 
     0.606
GCA_001015195_05025
Unannotated protein.
 
    
0.604
GCA_001015195_04191
Unannotated protein.
    
   0.523
GCA_001015195_00312
Unannotated protein.
  
     0.518
GCA_001015195_01758
Unannotated protein.
     
 0.472
Your Current Organism:
Sphingomonas sp. Y57
NCBI taxonomy Id: 334801
Other names: S. sp. Y57
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.