STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FVEG_00908WD_REPEATS_REGION domain-containing protein. (540 aa)    
Predicted Functional Partners:
FVEG_07802
Uncharacterized protein.
   
 
 0.954
FVEG_02207
Elongation factor 3.
   
    0.945
FVEG_01302
Valyl-tRNA synthetase.
   
 
 0.943
FVEG_06124
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.930
FVEG_08120
WD_REPEATS_REGION domain-containing protein.
   
  
 0.925
FVEG_05200
WD_REPEATS_REGION domain-containing protein.
   
  
 0.920
FVEG_11271
RRM domain-containing protein.
   
  
 0.917
FVEG_09681
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
  
 0.914
FVEG_00856
Nucleolar protein 12.
   
 
 0.910
FVEG_00350
Uncharacterized protein.
   
 
 0.906
Your Current Organism:
Fusarium verticillioides
NCBI taxonomy Id: 334819
Other names: F. verticillioides 7600, Fusarium verticillioides 7600, Gibberella moniliformis 7600
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