Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FVEG_00376 | FVEG_01302 | W7LCH8 | W7LQQ8 | 60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. | Valyl-tRNA synthetase. | 0.652 |
FVEG_00376 | FVEG_04157 | W7LCH8 | W7LUP7 | 60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. | Protein BCP1; Involved in nuclear export, actin cytoskeleton organization and vesicular transport; Belongs to the BCP1 family. | 0.890 |
FVEG_00376 | FVEG_05402 | W7LCH8 | W7M013 | 60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.970 |
FVEG_00376 | FVEG_07802 | W7LCH8 | W7MJ67 | 60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. | Uncharacterized protein. | 0.842 |
FVEG_00376 | FVEG_11271 | W7LCH8 | W7MN98 | 60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. | RRM domain-containing protein. | 0.889 |
FVEG_00376 | YTM1 | W7LCH8 | W7M8X1 | 60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.885 |
FVEG_01302 | FVEG_00376 | W7LQQ8 | W7LCH8 | Valyl-tRNA synthetase. | 60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. | 0.652 |
FVEG_01302 | FVEG_02646 | W7LQQ8 | W7LL28 | Valyl-tRNA synthetase. | Brix domain-containing protein. | 0.970 |
FVEG_01302 | FVEG_04157 | W7LQQ8 | W7LUP7 | Valyl-tRNA synthetase. | Protein BCP1; Involved in nuclear export, actin cytoskeleton organization and vesicular transport; Belongs to the BCP1 family. | 0.849 |
FVEG_01302 | FVEG_05402 | W7LQQ8 | W7M013 | Valyl-tRNA synthetase. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.997 |
FVEG_01302 | FVEG_05616 | W7LQQ8 | W7LZ46 | Valyl-tRNA synthetase. | 50S ribosomal protein L14; Belongs to the universal ribosomal protein uL14 family. | 0.451 |
FVEG_01302 | FVEG_07802 | W7LQQ8 | W7MJ67 | Valyl-tRNA synthetase. | Uncharacterized protein. | 0.996 |
FVEG_01302 | FVEG_09002 | W7LQQ8 | W7MPI2 | Valyl-tRNA synthetase. | WD_REPEATS_REGION domain-containing protein. | 0.875 |
FVEG_01302 | FVEG_11271 | W7LQQ8 | W7MN98 | Valyl-tRNA synthetase. | RRM domain-containing protein. | 0.998 |
FVEG_01302 | YTM1 | W7LQQ8 | W7M8X1 | Valyl-tRNA synthetase. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.985 |
FVEG_02646 | FVEG_01302 | W7LL28 | W7LQQ8 | Brix domain-containing protein. | Valyl-tRNA synthetase. | 0.970 |
FVEG_02646 | FVEG_04157 | W7LL28 | W7LUP7 | Brix domain-containing protein. | Protein BCP1; Involved in nuclear export, actin cytoskeleton organization and vesicular transport; Belongs to the BCP1 family. | 0.666 |
FVEG_02646 | FVEG_05402 | W7LL28 | W7M013 | Brix domain-containing protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.908 |
FVEG_02646 | FVEG_07802 | W7LL28 | W7MJ67 | Brix domain-containing protein. | Uncharacterized protein. | 0.917 |
FVEG_02646 | FVEG_09002 | W7LL28 | W7MPI2 | Brix domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.839 |
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