STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FVEG_02623Transcriptional coactivator HFI1/ADA1. (464 aa)    
Predicted Functional Partners:
FVEG_04964
Transcriptional activator SPT7.
   
 0.997
FVEG_06679
Transcription initiation factor TFIID subunit 6.
    
 0.996
FVEG_04676
Transcription initiation factor TFIID subunit 12.
    
 0.996
FVEG_00621
Transcription initiation factor TFIID subunit 9B.
    
 0.995
FVEG_07466
Transcription initiation factor TFIID subunit 5.
   
 0.995
FVEG_07136
SAGA-associated factor 73.
    
 0.995
FVEG_09721
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.993
FVEG_00442
Uncharacterized protein.
  
 
 0.983
FVEG_04724
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
   
 0.975
FVEG_11161
SAGA-associated factor 29.
    
 0.963
Your Current Organism:
Fusarium verticillioides
NCBI taxonomy Id: 334819
Other names: F. verticillioides 7600, Fusarium verticillioides 7600, Gibberella moniliformis 7600
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.