STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FVEG_15175Xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. (532 aa)    
Predicted Functional Partners:
FVEG_09861
Fn3_like domain-containing protein.
   
 0.903
FVEG_11664
Xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
  
 
0.901
FVEG_05801
Uncharacterized protein.
     
 0.803
FVEG_04797
Oxidoreductase.
   
  0.803
FVEG_12338
Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.
     
 0.803
FVEG_12744
Galacturan 1,4-alpha-galacturonidase; Belongs to the glycosyl hydrolase 28 family.
     
 0.803
FVEG_03354
PKS_ER domain-containing protein.
     
  0.800
FVEG_04304
Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
     
  0.800
FVEG_05504
Alcohol dehydrogenase (NADP+).
     
  0.800
FVEG_08451
Polygalacturonase.
     
  0.800
Your Current Organism:
Fusarium verticillioides
NCBI taxonomy Id: 334819
Other names: F. verticillioides 7600, Fusarium verticillioides 7600, Gibberella moniliformis 7600
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