Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FVEG_03354 | FVEG_04304 | W7LP71 | W7LVD5 | PKS_ER domain-containing protein. | Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. | 0.900 |
FVEG_03354 | FVEG_09861 | W7LP71 | W7MSS3 | PKS_ER domain-containing protein. | Fn3_like domain-containing protein. | 0.800 |
FVEG_03354 | FVEG_11664 | W7LP71 | W7MNZ9 | PKS_ER domain-containing protein. | Xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.800 |
FVEG_03354 | FVEG_15175 | W7LP71 | W7LZR4 | PKS_ER domain-containing protein. | Xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.800 |
FVEG_04304 | FVEG_03354 | W7LVD5 | W7LP71 | Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. | PKS_ER domain-containing protein. | 0.900 |
FVEG_04304 | FVEG_05504 | W7LVD5 | W7M0H3 | Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. | Alcohol dehydrogenase (NADP+). | 0.900 |
FVEG_04304 | FVEG_09861 | W7LVD5 | W7MSS3 | Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. | Fn3_like domain-containing protein. | 0.800 |
FVEG_04304 | FVEG_11664 | W7LVD5 | W7MNZ9 | Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. | Xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.800 |
FVEG_04304 | FVEG_15175 | W7LVD5 | W7LZR4 | Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. | Xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.800 |
FVEG_04797 | FVEG_05801 | W7M6P1 | W7M1H8 | Oxidoreductase. | Uncharacterized protein. | 0.900 |
FVEG_04797 | FVEG_08451 | W7M6P1 | W7MCP5 | Oxidoreductase. | Polygalacturonase. | 0.900 |
FVEG_04797 | FVEG_09861 | W7M6P1 | W7MSS3 | Oxidoreductase. | Fn3_like domain-containing protein. | 0.800 |
FVEG_04797 | FVEG_11664 | W7M6P1 | W7MNZ9 | Oxidoreductase. | Xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.803 |
FVEG_04797 | FVEG_12338 | W7M6P1 | W7N1L0 | Oxidoreductase. | Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family. | 0.900 |
FVEG_04797 | FVEG_12744 | W7M6P1 | W7N4I6 | Oxidoreductase. | Galacturan 1,4-alpha-galacturonidase; Belongs to the glycosyl hydrolase 28 family. | 0.900 |
FVEG_04797 | FVEG_15175 | W7M6P1 | W7LZR4 | Oxidoreductase. | Xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.803 |
FVEG_05504 | FVEG_04304 | W7M0H3 | W7LVD5 | Alcohol dehydrogenase (NADP+). | Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. | 0.900 |
FVEG_05504 | FVEG_09861 | W7M0H3 | W7MSS3 | Alcohol dehydrogenase (NADP+). | Fn3_like domain-containing protein. | 0.800 |
FVEG_05504 | FVEG_11664 | W7M0H3 | W7MNZ9 | Alcohol dehydrogenase (NADP+). | Xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.800 |
FVEG_05504 | FVEG_15175 | W7M0H3 | W7LZR4 | Alcohol dehydrogenase (NADP+). | Xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.800 |
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