STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FVEG_06959Pre-mRNA-splicing factor CWC21. (175 aa)    
Predicted Functional Partners:
FVEG_09474
WD_REPEATS_REGION domain-containing protein.
   
 0.997
FVEG_03791
Elongation factor 2.
    
 
 0.995
FVEG_06421
Pre-mRNA-splicing factor cef-1.
   
 
 0.995
FVEG_01338
Uncharacterized protein.
   
 
 0.993
FVEG_08262
Uncharacterized protein.
    
 
 0.992
FVEG_04805
Pre-mRNA-splicing factor CWC2.
    
 
 0.990
FVEG_08995
Pre-mRNA-processing factor 19.
    
 
 0.988
FVEG_05373
MI domain-containing protein.
    
 0.988
FVEG_00907
Adenosinetriphosphatase.
    
 0.983
FVEG_09212
Pre-mRNA-splicing factor spp42.
   
 
 0.982
Your Current Organism:
Fusarium verticillioides
NCBI taxonomy Id: 334819
Other names: F. verticillioides 7600, Fusarium verticillioides 7600, Gibberella moniliformis 7600
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.