STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FVEG_04957DNA polymerase iota subunit. (565 aa)    
Predicted Functional Partners:
FVEG_05166
3'-5' exonuclease domain-containing protein.
  
 0.969
FVEG_01184
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.933
FVEG_14789
Vezatin domain-containing protein.
   
 0.933
FVEG_02496
DNA polymerase.
   
 0.931
FVEG_06245
Mitotic spindle assembly checkpoint protein MAD2.
   
 0.922
FVEG_01162
DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.
  
 0.872
FVEG_02851
BRCT domain-containing protein.
   
 0.832
FVEG_03776
Zn(2)-C6 fungal-type domain-containing protein.
   
 0.832
FVEG_07286
Ubiquitin-60S ribosomal protein L40.
    
 0.821
FVEG_07288
RRN7-type domain-containing protein.
    
 0.821
Your Current Organism:
Fusarium verticillioides
NCBI taxonomy Id: 334819
Other names: F. verticillioides 7600, Fusarium verticillioides 7600, Gibberella moniliformis 7600
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