STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FVEG_05168DNA-directed RNA polymerase II subunit RPB11. (127 aa)    
Predicted Functional Partners:
FVEG_01347
DNA-directed RNA polymerase II subunit RPB7.
   
 0.999
FVEG_00658
DNA-directed RNA polymerase I, II, and III subunit RPABC5.
   
 0.999
FVEG_01252
DNA-directed RNA polymerase II subunit RPB4.
   
 0.999
FVEG_05615
DNA-directed RNA polymerase II subunit RPB9.
   
 0.999
FVEG_05432
DNA-directed RNA polymerase I, II, and III subunit RPABC2.
   
 0.999
FVEG_06367
DNA-directed RNA polymerase I, II, and III subunit RPABC1.
   
 0.999
FVEG_09529
DNA-directed RNA polymerase II subunit RPB3.
   
 0.999
FVEG_10463
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
   
 0.999
FVEG_10203
DNA-directed RNA polymerase I, II, and III subunit RPABC4.
   
 0.999
FVEG_09286
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.999
Your Current Organism:
Fusarium verticillioides
NCBI taxonomy Id: 334819
Other names: F. verticillioides 7600, Fusarium verticillioides 7600, Gibberella moniliformis 7600
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.