Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FVEG_01721 | FVEG_02951 | W7LSS7 | W7LQ28 | Uncharacterized protein. | Glutamine synthetase; Belongs to the glutamine synthetase family. | 0.589 |
FVEG_01721 | FVEG_07298 | W7LSS7 | W7MHL1 | Uncharacterized protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.906 |
FVEG_01721 | FVEG_07555 | W7LSS7 | W7MIM4 | Uncharacterized protein. | Ammonium transporter. | 0.472 |
FVEG_01721 | FVEG_12090 | W7LSS7 | W7N0Q0 | Uncharacterized protein. | Nitrate reductase (NADH). | 0.902 |
FVEG_02951 | FVEG_01721 | W7LQ28 | W7LSS7 | Glutamine synthetase; Belongs to the glutamine synthetase family. | Uncharacterized protein. | 0.589 |
FVEG_02951 | FVEG_07298 | W7LQ28 | W7MHL1 | Glutamine synthetase; Belongs to the glutamine synthetase family. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.589 |
FVEG_02951 | FVEG_07555 | W7LQ28 | W7MIM4 | Glutamine synthetase; Belongs to the glutamine synthetase family. | Ammonium transporter. | 0.442 |
FVEG_02951 | FVEG_12090 | W7LQ28 | W7N0Q0 | Glutamine synthetase; Belongs to the glutamine synthetase family. | Nitrate reductase (NADH). | 0.589 |
FVEG_07298 | FVEG_01721 | W7MHL1 | W7LSS7 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Uncharacterized protein. | 0.906 |
FVEG_07298 | FVEG_02951 | W7MHL1 | W7LQ28 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Glutamine synthetase; Belongs to the glutamine synthetase family. | 0.589 |
FVEG_07298 | FVEG_07555 | W7MHL1 | W7MIM4 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Ammonium transporter. | 0.472 |
FVEG_07298 | FVEG_12090 | W7MHL1 | W7N0Q0 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Nitrate reductase (NADH). | 0.989 |
FVEG_07555 | FVEG_01721 | W7MIM4 | W7LSS7 | Ammonium transporter. | Uncharacterized protein. | 0.472 |
FVEG_07555 | FVEG_02951 | W7MIM4 | W7LQ28 | Ammonium transporter. | Glutamine synthetase; Belongs to the glutamine synthetase family. | 0.442 |
FVEG_07555 | FVEG_07298 | W7MIM4 | W7MHL1 | Ammonium transporter. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.472 |
FVEG_07555 | FVEG_12090 | W7MIM4 | W7N0Q0 | Ammonium transporter. | Nitrate reductase (NADH). | 0.472 |
FVEG_12090 | FVEG_01721 | W7N0Q0 | W7LSS7 | Nitrate reductase (NADH). | Uncharacterized protein. | 0.902 |
FVEG_12090 | FVEG_02951 | W7N0Q0 | W7LQ28 | Nitrate reductase (NADH). | Glutamine synthetase; Belongs to the glutamine synthetase family. | 0.589 |
FVEG_12090 | FVEG_07298 | W7N0Q0 | W7MHL1 | Nitrate reductase (NADH). | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.989 |
FVEG_12090 | FVEG_07555 | W7N0Q0 | W7MIM4 | Nitrate reductase (NADH). | Ammonium transporter. | 0.472 |