STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FVEG_07561TPR_REGION domain-containing protein. (202 aa)    
Predicted Functional Partners:
FVEG_02468
Protein transporter Sec61 subunit gamma.
   
 
 0.767
FVEG_01342
Uncharacterized protein.
    
 
 0.761
FVEG_05476
Translocation protein SEC63.
    
 
 0.761
FVEG_06140
Uncharacterized protein.
    
 
 0.761
FVEG_06685
Protein transporter SEC61 subunit alpha.
    
 
 0.737
FVEG_09607
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.622
FVEG_04968
Uncharacterized protein.
    
 
 0.557
FVEG_11383
Calcium binding protein 39.
   
 0.548
Your Current Organism:
Fusarium verticillioides
NCBI taxonomy Id: 334819
Other names: F. verticillioides 7600, Fusarium verticillioides 7600, Gibberella moniliformis 7600
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.