STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FVEG_12770Uncharacterized protein. (870 aa)    
Predicted Functional Partners:
FVEG_06188
Uncharacterized protein.
   
 
 0.665
FVEG_05232
MRP-L46 domain-containing protein.
   
   0.653
FVEG_09621
Uncharacterized protein.
   
   0.641
FVEG_11405
Uncharacterized protein.
   
 
 0.599
FVEG_11585
Uncharacterized protein.
   
   0.591
FVEG_05293
Uncharacterized protein.
   
 
 0.585
FVEG_02592
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.574
FVEG_02673
MRP-S28 domain-containing protein.
   
   0.573
FVEG_06662
Uncharacterized protein.
   
 
 0.569
FVEG_08985
50S ribosomal protein L15.
   
   0.560
Your Current Organism:
Fusarium verticillioides
NCBI taxonomy Id: 334819
Other names: F. verticillioides 7600, Fusarium verticillioides 7600, Gibberella moniliformis 7600
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.