STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FVEG_10222Uncharacterized protein. (706 aa)    
Predicted Functional Partners:
FVEG_04542
Uncharacterized protein.
    
 0.977
FVEG_07795
C2H2-type domain-containing protein.
  
 
 0.957
FVEG_07159
Uncharacterized protein.
    
 0.950
FVEG_08221
Uncharacterized protein.
    
 
 0.715
FVEG_10160
Uncharacterized protein.
   
 0.666
FVEG_00714
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.657
FVEG_05219
SANT domain-containing protein.
    
 0.532
FVEG_02094
TATA-box-binding protein.
    
 0.514
FVEG_06887
DNA-directed RNA polymerase III subunit RPC8.
     
 0.472
FVEG_02385
Uncharacterized protein.
  
     0.454
Your Current Organism:
Fusarium verticillioides
NCBI taxonomy Id: 334819
Other names: F. verticillioides 7600, Fusarium verticillioides 7600, Gibberella moniliformis 7600
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