FVEG_09394 protein (Fusarium verticillioides)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

FVEG_09394

MaoC-like domain-containing protein. (309 aa)

Predicted Functional Partners:

FVEG_11528

0.924

FVEG_00886

0.836

FVEG_13399

0.752

FVEG_01301

0.657

FVEG_07327

0.629

FVEG_06944

0.614

FVEG_04736

0.608

FVEG_05363

0.599

FVEG_13890

0.598

FVEG_01807

0.598

Your Current Organism:

Fusarium verticillioides

NCBI taxonomy Id: 334819
Other names: F. verticillioides 7600, Fusarium verticillioides 7600, Gibberella moniliformis 7600

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FVEG_00886	FVEG_09394	W7LX72	W7N045	CAP-Gly domain-containing protein.	MaoC-like domain-containing protein.	0.836
FVEG_01301	FVEG_01807	W7LZ04	W7LJF0	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.578
FVEG_01301	FVEG_05363	W7LZ04	W7M9X5	TPR_REGION domain-containing protein.	Oxidoreductase.	0.979
FVEG_01301	FVEG_06944	W7LZ04	W7MPC3	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.730
FVEG_01301	FVEG_07327	W7LZ04	W7MR60	TPR_REGION domain-containing protein.	Carnitine O-acetyltransferase; Belongs to the carnitine/choline acetyltransferase family.	0.796
FVEG_01301	FVEG_09394	W7LZ04	W7N045	TPR_REGION domain-containing protein.	MaoC-like domain-containing protein.	0.657
FVEG_01301	FVEG_11528	W7LZ04	W7MPG0	TPR_REGION domain-containing protein.	Sterol carrier protein 2; Belongs to the thiolase-like superfamily. Thiolase family.	0.999
FVEG_01301	FVEG_13399	W7LZ04	W7NGG6	TPR_REGION domain-containing protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.683
FVEG_01301	FVEG_13890	W7LZ04	A0A139YBG0	TPR_REGION domain-containing protein.	Acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.578
FVEG_01807	FVEG_01301	W7LJF0	W7LZ04	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.578
FVEG_01807	FVEG_05363	W7LJF0	W7M9X5	Uncharacterized protein.	Oxidoreductase.	0.741
FVEG_01807	FVEG_06944	W7LJF0	W7MPC3	Uncharacterized protein.	Uncharacterized protein.	0.661
FVEG_01807	FVEG_07327	W7LJF0	W7MR60	Uncharacterized protein.	Carnitine O-acetyltransferase; Belongs to the carnitine/choline acetyltransferase family.	0.445
FVEG_01807	FVEG_09394	W7LJF0	W7N045	Uncharacterized protein.	MaoC-like domain-containing protein.	0.598
FVEG_01807	FVEG_11528	W7LJF0	W7MPG0	Uncharacterized protein.	Sterol carrier protein 2; Belongs to the thiolase-like superfamily. Thiolase family.	0.706
FVEG_01807	FVEG_13399	W7LJF0	W7NGG6	Uncharacterized protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.609
FVEG_04736	FVEG_09394	W7MED9	W7N045	Uncharacterized protein.	MaoC-like domain-containing protein.	0.608
FVEG_05363	FVEG_01301	W7M9X5	W7LZ04	Oxidoreductase.	TPR_REGION domain-containing protein.	0.979
FVEG_05363	FVEG_01807	W7M9X5	W7LJF0	Oxidoreductase.	Uncharacterized protein.	0.741
FVEG_05363	FVEG_06944	W7M9X5	W7MPC3	Oxidoreductase.	Uncharacterized protein.	0.739