STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000000028PHD finger protein 19. (263 aa)    
Predicted Functional Partners:
CCH79_00020082
Mtf2_C domain-containing protein.
 
     0.936
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
   
 0.902
CCH79_00013391
WD_REPEATS_REGION domain-containing protein.
   
 0.900
CCH79_00008223
DUF3677 domain-containing protein.
    
 0.897
CCH79_00008770
Uncharacterized protein.
    
 0.879
CCH79_00014075
Uncharacterized protein.
    
 0.878
CCH79_00019067
Uncharacterized protein.
   
 0.856
CCH79_00016501
VEFS-Box domain-containing protein.
   
 0.835
CCH79_00012415
VEFS-Box domain-containing protein.
   
 0.835
CCH79_00018053
WD_REPEATS_REGION domain-containing protein.
   
 0.827
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.