STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00017227Uncharacterized protein. (280 aa)    
Predicted Functional Partners:
ENSGAFP00000019919
TNF receptor-associated factor 6.
    
 0.693
CCH79_00015841
Uncharacterized protein.
    
 0.672
VANGL1
Uncharacterized protein.
    
 0.672
VANGL2
Uncharacterized protein.
    
 0.672
ENSGAFP00000031663
VANGL planar cell polarity protein 1.
    
 0.672
CCH79_00012938
Uncharacterized protein.
    
 0.660
CCH79_00006571
Uncharacterized protein.
    
 0.660
CCH79_00005152
Uncharacterized protein.
    
 0.660
ENSGAFP00000025166
annotation not available
    
 0.660
CCH79_00019766
Uncharacterized protein.
    
 0.660
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.