STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00017244UPAR/Ly6 domain-containing protein. (117 aa)    
Predicted Functional Partners:
ENSGAFP00000024624
Syntaxin 5A.
     
 0.822
CCH79_00002484
Uncharacterized protein.
     
 0.778
CCH79_00001132
MACPF domain-containing protein.
    
 0.729
CCH79_00003155
Uncharacterized protein.
     
 0.678
ENSGAFP00000011744
annotation not available
     
 0.678
CCH79_00001223
GOLD domain-containing protein.
    
  0.644
ENSGAFP00000023587
annotation not available
     
 0.624
CCH79_00011681
Uncharacterized protein.
     
 0.618
ENSGAFP00000017940
annotation not available
   
  
 0.607
CCH79_00005593
Uncharacterized protein.
     
 0.607
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.