STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00017265PCI domain-containing protein. (399 aa)    
Predicted Functional Partners:
ENSGAFP00000026717
SEM1 26S proteasome complex subunit.
    
 
 0.978
ENSGAFP00000019586
Leukocyte receptor cluster (LRC) member 8.
   
 
 0.974
CCH79_00013775
Uncharacterized protein.
   
 
 0.960
CCH79_00007208
Uncharacterized protein.
   
 
 0.951
ENY2
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]
    
 
 0.948
CCH79_00001282
Uncharacterized protein.
    
 
 0.863
CCH79_00005890
Uncharacterized protein.
    
 
 0.822
CCH79_00005578
Uncharacterized protein.
    
 
 0.822
CCH79_00018715
ISPD_C domain-containing protein.
    
 
 0.784
CCH79_00012555
Uncharacterized protein.
    
 
 0.742
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.