STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00001329Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (586 aa)    
Predicted Functional Partners:
CCH79_00004095
Uncharacterized protein.
 
  
  0.547
CCH79_00015986
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
    
 
0.547
CCH79_00010575
Uncharacterized protein.
 
  
  0.547
CCH79_00019217
Uncharacterized protein.
 
  
  0.547
CCH79_00002143
RING-type domain-containing protein.
      
 0.541
CCH79_00000173
Uncharacterized protein.
      
 0.540
ENSGAFP00000023011
Programmed cell death 6 interacting protein.
   
 
  0.518
CCH79_00005006
Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
      
 0.482
CCH79_00009239
SEC7 domain-containing protein.
      
 0.480
CCH79_00020242
Uncharacterized protein.
   
    0.463
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.