Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00001121Transcription factor BTF3; Belongs to the NAC-beta family. (162 aa)    
Predicted Functional Partners:
CCH79_00006601
NAC-A/B domain-containing protein.
   
 0.995
CCH79_00007674
NAC-A/B domain-containing protein.
   
 0.988
ENSGAFP00000007574
Ribosomal protein S6.
   
 
 0.983
CCH79_00013183
Uncharacterized protein.
   
 
 0.983
CCH79_00015289
Ribos_L4_asso_C domain-containing protein.
   
 
 0.982
CCH79_00008639
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
   
   0.980
ENSGAFP00000031570
Ribosomal protein L24.
   
   0.980
CCH79_00013904
Uncharacterized protein.
  
 
 0.979
CCH79_00001079
Ribosomal_L7Ae domain-containing protein.
   
 
 0.977
CCH79_00006035
WD_REPEATS_REGION domain-containing protein.
   
 
 0.976
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.