STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00001872Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (155 aa)    
Predicted Functional Partners:
CCH79_00007427
Uncharacterized protein.
  
 
 0.999
CCH79_00001112
Uncharacterized protein.
   
 
 0.999
CCH79_00007020
Ribosomal_L6e_N domain-containing protein.
  
 0.999
CCH79_00014111
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.999
CCH79_00005707
Uncharacterized protein.
  
 0.999
CCH79_00003638
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.999
CCH79_00005716
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.
  
 0.999
CCH79_00012598
Uncharacterized protein.
   
 
 0.999
CCH79_00020728
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 
 0.999
ENSGAFP00000003134
Ribosomal protein S23.
  
 
 0.999
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.