STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000001032Protein phosphatase, Mg2+/Mn2+ dependent, 1J. (498 aa)    
Predicted Functional Partners:
CCH79_00012304
PPM-type phosphatase domain-containing protein.
      
 0.685
RAB29
Uncharacterized protein.
    
 
 0.667
CCH79_00018593
PPM-type phosphatase domain-containing protein.
      
 0.633
CCH79_00000362
Uncharacterized protein.
    
 
 0.594
ENSGAFP00000027415
Rab interacting lysosomal protein-like 2.
      
 0.531
CCH79_00017496
LsmAD domain-containing protein.
      
 0.529
CCH79_00008789
Uncharacterized protein.
      
 0.524
CCH79_00016523
Uncharacterized protein.
    
 
 0.507
ENSGAFP00000017501
RAB35, member RAS oncogene family b.
    
 
 0.507
CCH79_00003036
Lactamase_B domain-containing protein.
      
 0.413
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.