Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00003465Uncharacterized protein. (304 aa)    
Predicted Functional Partners:
CCH79_00005421
Death domain-containing protein.
   
 
 0.953
CCH79_00020368
Uncharacterized protein.
   
   0.920
PUF60
Uncharacterized protein.
   
   0.920
CCH79_00016043
Uncharacterized protein.
   
   0.883
CCH79_00003666
Uncharacterized protein; Belongs to the cyclin family.
    
   0.879
CCH79_00016888
Protein kinase domain-containing protein.
   
   0.853
CCH79_00010179
Protein kinase domain-containing protein.
   
   0.853
ENSGAFP00000012552
Splicing factor 3a, subunit 2.
   
   0.833
CCH79_00011954
Uncharacterized protein.
     
 0.832
CCH79_00003023
Uncharacterized protein.
    
 
 0.791
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (18%) [HD]