STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00003465Uncharacterized protein. (304 aa)    
Predicted Functional Partners:
CCH79_00013293
Uncharacterized protein.
   
 
 0.706
CCH79_00020368
Uncharacterized protein.
   
   0.682
PUF60
Uncharacterized protein.
   
   0.682
ENSGAFP00000007617
Translocase of outer mitochondrial membrane 20.
   
 
  0.646
CCH79_00007750
ARID domain-containing protein.
   
 
  0.646
CCH79_00018848
Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins.
   
 
  0.631
CCH79_00011094
Uncharacterized protein.
   
 
  0.626
CCH79_00011954
Uncharacterized protein.
     
 0.616
CCH79_00005421
Death domain-containing protein.
   
   0.591
CCH79_00016888
Protein kinase domain-containing protein.
   
   0.577
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.