Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000001038Forkhead box D1. (153 aa)    
Predicted Functional Partners:
CCH79_00005720
zf-Tim10_DDP domain-containing protein; Belongs to the small Tim family.
    
   0.701
CCH79_00007125
zf-Tim10_DDP domain-containing protein; Belongs to the small Tim family.
    
   0.701
CCH79_00018785
zf-Tim10_DDP domain-containing protein; Belongs to the small Tim family.
    
   0.701
CCH79_00020137
Proteasome subunit beta.
      
 0.681
CCH79_00000046
Uncharacterized protein.
    
 0.653
CCH79_00001020
Uncharacterized protein.
    
 
 0.594
CCH79_00011531
Uncharacterized protein.
     
 0.591
ENSGAFP00000009841
Wingless-type MMTV integration site family, member 4.
      
 0.582
CCH79_00000682
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
  0.577
CCH79_00005955
Uncharacterized protein.
    
  0.577
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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