STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000001038Forkhead box D1. (153 aa)    
Predicted Functional Partners:
ENSGAFP00000004580
Sulfite oxidase.
     
 0.657
ENSGAFP00000009315
Serum/glucocorticoid regulated kinase family member 3.
    
 0.635
CCH79_00001020
Uncharacterized protein.
    
 
 0.635
CCH79_00009181
HECT domain-containing protein.
    
 0.629
CCH79_00020137
Proteasome subunit beta.
      
 0.594
CCH79_00005810
Uncharacterized protein.
    
  0.570
ENSGAFP00000018352
Solute carrier family 45 member 1.
    
 
 0.542
CCH79_00002220
Uncharacterized protein.
    
 0.541
ENSGAFP00000032000
BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase).
    
 0.538
CCH79_00001359
Deacetylase sirtuin-type domain-containing protein.
    
 0.531
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.