STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000001066Glycoprotein Ib platelet subunit beta. (206 aa)    
Predicted Functional Partners:
ENSGAFP00000023270
Glycoprotein IX (platelet).
   
0.986
CCH79_00019709
LRRCT domain-containing protein.
   
 0.954
CCH79_00012254
Uncharacterized protein.
   
 0.930
CCH79_00003277
Uncharacterized protein.
   
 0.924
CCH79_00007095
Uncharacterized protein.
   
 
0.905
CCH79_00012260
Uncharacterized protein.
   
 0.789
CCH79_00006315
Uncharacterized protein.
   
 0.789
ENSGAFP00000020054
Si:ch211-117l17.7.
   
 
 0.778
ENSGAFP00000020043
annotation not available
   
 
0.750
ENSGAFP00000030927
annotation not available
   
 0.734
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.