STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00003466Integrin beta. (247 aa)    
Predicted Functional Partners:
CCH79_00002766
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
   
 0.960
CCH79_00005160
Uncharacterized protein; Belongs to the integrin alpha chain family.
   
 0.944
ENSGAFP00000011778
annotation not available
   
 0.916
ENSGAFP00000028110
Laminin, gamma 1.
   
 0.916
ENSGAFP00000001283
Integrin, beta 4.
 
     0.915
ENSGAFP00000008947
Paxillin b.
    
 0.913
CCH79_00018162
Uncharacterized protein.
   
 0.909
CCH79_00012200
Uncharacterized protein.
   
 0.906
SRC
SRC proto-oncogene, non-receptor tyrosine kinase.
    
 0.899
ENSGAFP00000029540
V-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog.
    
 0.899
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.