Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00002350Uncharacterized protein. (205 aa)    
Predicted Functional Partners:
CCH79_00003760
Vps53_N domain-containing protein.
    
 0.896
RIC1
RIC1 domain-containing protein.
   
 0.894
CCH79_00012112
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.850
CCH79_00020382
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
 0.841
ENSGAFP00000000030
annotation not available
    
 0.833
CCH79_00012860
Uncharacterized protein.
    
 0.812
CCH79_00014112
Uncharacterized protein.
    
 0.790
CCH79_00006377
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.759
CCH79_00016094
Uncharacterized protein.
   
 0.759
ENSGAFP00000032041
Zgc:112334.
   
 0.759
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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