Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NKAPLNkap_C domain-containing protein. (387 aa)    
Predicted Functional Partners:
CCH79_00007190
Uncharacterized protein.
    
 0.995
CCH79_00006020
Slu7 domain-containing protein.
   
 0.992
CCH79_00005187
Uncharacterized protein.
    
 0.989
ENSGAFP00000014630
Peptidylprolyl isomerase (cyclophilin)-like 1.
    
  0.987
CCH79_00006868
Uncharacterized protein.
   
  0.987
CCH79_00000378
WD_REPEATS_REGION domain-containing protein.
    
  0.987
ENSGAFP00000031396
CWC22 spliceosome associated protein homolog.
   
  0.987
CCH79_00001187
Uncharacterized protein.
    
  0.986
CCH79_00007654
Uncharacterized protein.
    
  0.986
CCH79_00004662
Uncharacterized protein.
   
 0.986
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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